Introduction | Applying the algorithm | The aeddo package implements S3 methods | Formulation of the hiearchical generalzied linear model | Inference on individual groups | The rationale for employing the Gamma distribution as a second stage model | The three steps of the algorithm
Package: aeddo 0.1.1.9000
Lasse Engbo Christiansen
aeddo: Automated and Early Detection of Disease Outbreaks
A powerful tool for automating the early detection of disease outbreaks in time series data. 'aeddo' employs advanced statistical methods, including hierarchical models, in an innovative manner to effectively characterize outbreak signals. It is particularly useful for epidemiologists, public health professionals, and researchers seeking to identify and respond to disease outbreaks in a timely fashion. For a detailed reference on hierarchical models, consult Henrik Madsen and Poul Thyregod's book (2011), ISBN: 9781420091557.
Authors:
aeddo_0.1.1.9000.tar.gz
aeddo_0.1.1.9000.zip(r-4.7)aeddo_0.1.1.9000.zip(r-4.6)aeddo_0.1.1.9000.zip(r-4.5)
aeddo_0.1.1.9000.tgz(r-4.6-any)aeddo_0.1.1.9000.tgz(r-4.5-any)
aeddo_0.1.1.9000.tar.gz(r-4.7-any)aeddo_0.1.1.9000.tar.gz(r-4.6-any)
aeddo_0.1.1.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
aeddo/json (API)
| # Install 'aeddo' in R: |
| install.packages('aeddo', repos = c('https://ssi-dk.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ssi-dk/aeddo/issues
Pkgdown/docs site:https://ssi-dk.github.io
Last updated from:541242c449. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 152 | ||
| source / vignettes | OK | 233 | ||
| linux-release-x86_64 | OK | 170 | ||
| macos-release-arm64 | OK | 107 | ||
| macos-oldrel-arm64 | OK | 118 | ||
| windows-devel | OK | 94 | ||
| windows-release | OK | 95 | ||
| windows-oldrel | OK | 87 | ||
| wasm-release | OK | 114 |
Exports:%>%aeddoautoplotnll_poisson_gamma
Dependencies:backportscheckmateclicpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Automated and Early Detection of Disease Outbreaks | aeddo |
| Create a complete 'ggplot' appropriate to a particular data type | autoplot autoplot.aeddo |
| Negative Log-Likelihood for Poisson Gamma Model | nll_poisson_gamma |
| Create a complete 'ggplot' appropriate to a particular data type | plot plot.aeddo |